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data preprocessing software (idps  (Inscopix Inc)

 
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    Inscopix Inc data preprocessing software (idps
    (A) Key parameters involved in each of the three major <t>data</t> processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from <t>Inscopix</t> Data <t>Preprocessing</t> <t>Software</t> (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.
    Data Preprocessing Software (Idps, supplied by Inscopix Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/data preprocessing software (idps/product/Inscopix Inc
    Average 90 stars, based on 1 article reviews
    data preprocessing software (idps - by Bioz Stars, 2026-03
    90/100 stars

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    1) Product Images from "Robust characterization of selectivity of individual neurons to distinct task-relevant behavioral states using calcium imaging"

    Article Title: Robust characterization of selectivity of individual neurons to distinct task-relevant behavioral states using calcium imaging

    Journal: bioRxiv

    doi: 10.1101/2024.11.30.626195

    (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.
    Figure Legend Snippet: (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.

    Techniques Used: Software



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    data preprocessing software (idps  (Inscopix Inc)
    90
    Inscopix Inc data preprocessing software (idps
    (A) Key parameters involved in each of the three major <t>data</t> processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from <t>Inscopix</t> Data <t>Preprocessing</t> <t>Software</t> (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.
    Data Preprocessing Software (Idps, supplied by Inscopix Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/data preprocessing software (idps/product/Inscopix Inc
    Average 90 stars, based on 1 article reviews
    data preprocessing software (idps - by Bioz Stars, 2026-03
    90/100 stars
    		  Buy from Supplier

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    (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.

    Journal: bioRxiv

    Article Title: Robust characterization of selectivity of individual neurons to distinct task-relevant behavioral states using calcium imaging

    doi: 10.1101/2024.11.30.626195

    Figure Lengend Snippet: (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.

    Article Snippet: Raw movie data were preprocessed using the Inscopix Data Preprocessing Software (IDPS).

    Techniques: Software